CRISPRone

CRISPRone report for GCA_007114145.1_ASM711414v1

♦ Seq 1: VILQ01000005.1 Clostridioides difficile strain Gcol.A92 .cdiff_col_A92.5, whole genome shotgun sequence

⇒Summary: seq-len = 290453 bp; # of CRISPR array = 2; # of cas gene = 3  (type III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 79280-79966 bp]: array | spacers
           [Locus range 288355-289374 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: VILQ01000016.1 Clostridioides difficile strain Gcol.A92 .cdiff_col_A92.16, whole genome shotgun sequence

⇒Summary: seq-len = 107976 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 76226-76586 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: VILQ01000031.1 Clostridioides difficile strain Gcol.A92 .cdiff_col_A92.31, whole genome shotgun sequence

⇒Summary: seq-len = 10800 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1335-1888 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: VILQ01000002.1 Clostridioides difficile strain Gcol.A92 .cdiff_col_A92.2, whole genome shotgun sequence

⇒Summary: seq-len = 367138 bp; # of CRISPR array = 0; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: VILQ01000003.1 Clostridioides difficile strain Gcol.A92 .cdiff_col_A92.3, whole genome shotgun sequence

⇒Summary: seq-len = 336876 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 299672-300298 bp]: array | spacers
           [Locus range 318376-319923 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: VILQ01000030.1 Clostridioides difficile strain Gcol.A92 .cdiff_col_A92.30, whole genome shotgun sequence

⇒Summary: seq-len = 11486 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 4469-4826 bp]: array | spacers
           [Locus range 6690-7045 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: VILQ01000001.1 Clostridioides difficile strain Gcol.A92 .cdiff_col_A92.1, whole genome shotgun sequence

⇒Summary: seq-len = 458862 bp; # of CRISPR array = 2; # of cas gene = 2  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 113193-114344 bp]: array | spacers
           [Locus range 422121-422215 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: VILQ01000011.1 Clostridioides difficile strain Gcol.A92 .cdiff_col_A92.11, whole genome shotgun sequence

⇒Summary: seq-len = 141596 bp; # of CRISPR array = 1; # of cas gene = 10  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 26193-27810 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: VILQ01000004.1 Clostridioides difficile strain Gcol.A92 .cdiff_col_A92.4, whole genome shotgun sequence

⇒Summary: seq-len = 301790 bp; # of CRISPR array = 1; # of cas gene = 5  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 184687-185309 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)