CRISPRone

CRISPRone report for GCA_007114185.1_ASM711418v1

♦ Seq 1: VILR01000011.1 Clostridioides difficile strain Gcol.A91 .cdiff_col_A91.11, whole genome shotgun sequence

⇒Summary: seq-len = 141538 bp; # of CRISPR array = 1; # of cas gene = 10  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 113788-115404 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: VILR01000016.1 Clostridioides difficile strain Gcol.A91 .cdiff_col_A91.16, whole genome shotgun sequence

⇒Summary: seq-len = 107991 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 31406-31767 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: VILR01000002.1 Clostridioides difficile strain Gcol.A91 .cdiff_col_A91.2, whole genome shotgun sequence

⇒Summary: seq-len = 367993 bp; # of CRISPR array = 0; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: VILR01000031.1 Clostridioides difficile strain Gcol.A91 .cdiff_col_A91.31, whole genome shotgun sequence

⇒Summary: seq-len = 13822 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1335-1888 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: VILR01000005.1 Clostridioides difficile strain Gcol.A91 .cdiff_col_A91.5, whole genome shotgun sequence

⇒Summary: seq-len = 290415 bp; # of CRISPR array = 2; # of cas gene = 3  (type III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 1047-2067 bp]: array | spacers
           [Locus range 210455-211142 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: VILR01000033.1 Clostridioides difficile strain Gcol.A91 .cdiff_col_A91.33, whole genome shotgun sequence

⇒Summary: seq-len = 11510 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 4492-4849 bp]: array | spacers
           [Locus range 6713-7068 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: VILR01000003.1 Clostridioides difficile strain Gcol.A91 .cdiff_col_A91.3, whole genome shotgun sequence

⇒Summary: seq-len = 351232 bp; # of CRISPR array = 1; # of cas gene = 5  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 184482-185104 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: VILR01000001.1 Clostridioides difficile strain Gcol.A91 .cdiff_col_A91.1, whole genome shotgun sequence

⇒Summary: seq-len = 462468 bp; # of CRISPR array = 2; # of cas gene = 2  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 39263-39358 bp]: array | spacers
           [Locus range 347135-348285 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: VILR01000004.1 Clostridioides difficile strain Gcol.A91 .cdiff_col_A91.4, whole genome shotgun sequence

⇒Summary: seq-len = 337151 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 299946-300572 bp]: array | spacers
           [Locus range 318650-320197 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)