CRISPRone

CRISPRone report for GCA_007114685.1_ASM711468v1

♦ Seq 1: VIMR01000002.1 Clostridioides difficile strain Gcol.A52 .cdiff_col_A52.2, whole genome shotgun sequence

⇒Summary: seq-len = 367131 bp; # of CRISPR array = 0; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: VIMR01000007.1 Clostridioides difficile strain Gcol.A52 .cdiff_col_A52.7, whole genome shotgun sequence

⇒Summary: seq-len = 187852 bp; # of CRISPR array = 1; # of cas gene = 5  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 70749-71371 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: VIMR01000017.1 Clostridioides difficile strain Gcol.A52 .cdiff_col_A52.17, whole genome shotgun sequence

⇒Summary: seq-len = 110002 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 30796-31157 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: VIMR01000004.1 Clostridioides difficile strain Gcol.A52 .cdiff_col_A52.4, whole genome shotgun sequence

⇒Summary: seq-len = 290468 bp; # of CRISPR array = 2; # of cas gene = 3  (type III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 1080-2100 bp]: array | spacers
           [Locus range 210488-211175 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: VIMR01000035.1 Clostridioides difficile strain Gcol.A52 .cdiff_col_A52.35, whole genome shotgun sequence

⇒Summary: seq-len = 10406 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1335-1888 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: VIMR01000011.1 Clostridioides difficile strain Gcol.A52 .cdiff_col_A52.11, whole genome shotgun sequence

⇒Summary: seq-len = 141572 bp; # of CRISPR array = 1; # of cas gene = 10  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 113788-115404 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: VIMR01000001.1 Clostridioides difficile strain Gcol.A52 .cdiff_col_A52.1, whole genome shotgun sequence

⇒Summary: seq-len = 456214 bp; # of CRISPR array = 2; # of cas gene = 2  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 33019-33114 bp]: array | spacers
           [Locus range 340891-342041 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: VIMR01000003.1 Clostridioides difficile strain Gcol.A52 .cdiff_col_A52.3, whole genome shotgun sequence

⇒Summary: seq-len = 336872 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 299672-300298 bp]: array | spacers
           [Locus range 318376-319923 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: VIMR01000034.1 Clostridioides difficile strain Gcol.A52 .cdiff_col_A52.34, whole genome shotgun sequence

⇒Summary: seq-len = 11475 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 4456-4813 bp]: array | spacers
           [Locus range 6677-7032 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)