CRISPRone

CRISPRone report for GCA_007114695.1_ASM711469v1

♦ Seq 1: VIMT01000034.1 Clostridioides difficile strain Gcol.A49 .cdiff_col_A49.34, whole genome shotgun sequence

⇒Summary: seq-len = 10420 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 8534-9086 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: VIMT01000007.1 Clostridioides difficile strain Gcol.A49 .cdiff_col_A49.7, whole genome shotgun sequence

⇒Summary: seq-len = 187947 bp; # of CRISPR array = 1; # of cas gene = 5  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 70844-71466 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: VIMT01000004.1 Clostridioides difficile strain Gcol.A49 .cdiff_col_A49.4, whole genome shotgun sequence

⇒Summary: seq-len = 290645 bp; # of CRISPR array = 2; # of cas gene = 3  (type III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 1080-2100 bp]: array | spacers
           [Locus range 210488-211175 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: VIMT01000017.1 Clostridioides difficile strain Gcol.A49 .cdiff_col_A49.17, whole genome shotgun sequence

⇒Summary: seq-len = 107991 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 31406-31767 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: VIMT01000002.1 Clostridioides difficile strain Gcol.A49 .cdiff_col_A49.2, whole genome shotgun sequence

⇒Summary: seq-len = 367993 bp; # of CRISPR array = 0; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: VIMT01000001.1 Clostridioides difficile strain Gcol.A49 .cdiff_col_A49.1, whole genome shotgun sequence

⇒Summary: seq-len = 455972 bp; # of CRISPR array = 2; # of cas gene = 3  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 113925-115076 bp]: array | spacers
           [Locus range 422853-422947 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: VIMT01000011.1 Clostridioides difficile strain Gcol.A49 .cdiff_col_A49.11, whole genome shotgun sequence

⇒Summary: seq-len = 141661 bp; # of CRISPR array = 1; # of cas gene = 10  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 113911-115527 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: VIMT01000033.1 Clostridioides difficile strain Gcol.A49 .cdiff_col_A49.33, whole genome shotgun sequence

⇒Summary: seq-len = 11483 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 4461-4818 bp]: array | spacers
           [Locus range 6682-7037 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: VIMT01000003.1 Clostridioides difficile strain Gcol.A49 .cdiff_col_A49.3, whole genome shotgun sequence

⇒Summary: seq-len = 336875 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 299672-300298 bp]: array | spacers
           [Locus range 318376-319923 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)