CRISPRone

CRISPRone report for GCA_007114705.1_ASM711470v1

♦ Seq 1: VIMS01000003.1 Clostridioides difficile strain Gcol.A51 .cdiff_col_A51.3, whole genome shotgun sequence

⇒Summary: seq-len = 367993 bp; # of CRISPR array = 0; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: VIMS01000013.1 Clostridioides difficile strain Gcol.A51 .cdiff_col_A51.13, whole genome shotgun sequence

⇒Summary: seq-len = 123590 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 31406-31767 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: VIMS01000033.1 Clostridioides difficile strain Gcol.A51 .cdiff_col_A51.33, whole genome shotgun sequence

⇒Summary: seq-len = 10800 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1335-1888 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: VIMS01000002.1 Clostridioides difficile strain Gcol.A51 .cdiff_col_A51.2, whole genome shotgun sequence

⇒Summary: seq-len = 384286 bp; # of CRISPR array = 2; # of cas gene = 3  (type III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 173113-173799 bp]: array | spacers
           [Locus range 382188-383207 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: VIMS01000007.1 Clostridioides difficile strain Gcol.A51 .cdiff_col_A51.7, whole genome shotgun sequence

⇒Summary: seq-len = 187852 bp; # of CRISPR array = 1; # of cas gene = 5  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 70749-71371 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: VIMS01000001.1 Clostridioides difficile strain Gcol.A51 .cdiff_col_A51.1, whole genome shotgun sequence

⇒Summary: seq-len = 467890 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 125850-127001 bp]: array | spacers
           [Locus range 434778-434872 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: VIMS01000004.1 Clostridioides difficile strain Gcol.A51 .cdiff_col_A51.4, whole genome shotgun sequence

⇒Summary: seq-len = 336879 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 299672-300298 bp]: array | spacers
           [Locus range 318376-319923 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: VIMS01000032.1 Clostridioides difficile strain Gcol.A51 .cdiff_col_A51.32, whole genome shotgun sequence

⇒Summary: seq-len = 11480 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 4442-4796 bp]: array | spacers
           [Locus range 6661-7017 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: VIMS01000008.1 Clostridioides difficile strain Gcol.A51 .cdiff_col_A51.8, whole genome shotgun sequence

⇒Summary: seq-len = 164514 bp; # of CRISPR array = 1; # of cas gene = 10  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 136764-138380 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)