CRISPRone
CRISPRone report for GCA_007114915.1_ASM711491v1
♦ Seq 1: VINF01000001.1 Clostridioides difficile strain Gcol.A28 .cdiff_col_A28.1, whole genome shotgun sequence
⇒Summary: seq-len = 630322 bp; # of CRISPR array = 4; # of cas gene = 3 (type III) 
⇒Visulization of predicted CRISPR-Cas system(s) 
⇒Cas loci & CRISPR arrays: gff file
⇒Predicted cas genes: protein | gene
⇒CRISPR arrays :
[Locus range 23304-23595 bp]: array | spacers
[Locus range 116698-117452 bp]: array | spacers
[Locus range 230107-230793 bp]: array | spacers
[Locus range 439046-440002 bp]: array | spacers
⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)
♦ Seq 2: VINF01000012.1 Clostridioides difficile strain Gcol.A28 .cdiff_col_A28.12, whole genome shotgun sequence
⇒Summary: seq-len = 134459 bp; # of CRISPR array = 1; # of cas gene = 9 (type I)
⇒Visulization of predicted CRISPR-Cas system(s)
⇒Cas loci & CRISPR arrays: gff file
⇒Predicted cas genes: protein | gene
⇒CRISPR arrays :
[Locus range 108431-109778 bp]: array | spacers
⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)
♦ Seq 3: VINF01000006.1 Clostridioides difficile strain Gcol.A28 .cdiff_col_A28.6, whole genome shotgun sequence
⇒Summary: seq-len = 209403 bp; # of CRISPR array = 0; # of cas gene = 6 (type I, III)
⇒Visulization of predicted CRISPR-Cas system(s)
⇒Cas loci & CRISPR arrays: gff file
⇒Predicted cas genes: protein | gene
⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)
♦ Seq 4: VINF01000002.1 Clostridioides difficile strain Gcol.A28 .cdiff_col_A28.2, whole genome shotgun sequence
⇒Summary: seq-len = 552389 bp; # of CRISPR array = 3; # of cas gene = 8 (type I)
⇒Visulization of predicted CRISPR-Cas system(s)
⇒Cas loci & CRISPR arrays: gff file
⇒Predicted cas genes: protein | gene
⇒CRISPR arrays :
[Locus range 196194-196420 bp]: array | spacers
[Locus range 239972-240330 bp]: array | spacers
[Locus range 350802-352741 bp]: array | spacers
⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)
♦ Seq 5: VINF01000008.1 Clostridioides difficile strain Gcol.A28 .cdiff_col_A28.8, whole genome shotgun sequence
⇒Summary: seq-len = 181349 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)
⇒Visulization of predicted CRISPR-Cas system(s)
⇒Cas loci & CRISPR arrays: gff file
⇒CRISPR arrays :
[Locus range 148457-149147 bp]: array | spacers
⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)
⇒Visulization of predicted CRISPR-Cas system(s)
[Locus range 108431-109778 bp]: array | spacers
⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)
♦ Seq 3: VINF01000006.1 Clostridioides difficile strain Gcol.A28 .cdiff_col_A28.6, whole genome shotgun sequence
⇒Summary: seq-len = 209403 bp; # of CRISPR array = 0; # of cas gene = 6 (type I, III)
⇒Visulization of predicted CRISPR-Cas system(s)
⇒Cas loci & CRISPR arrays: gff file
⇒Predicted cas genes: protein | gene
⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)
♦ Seq 4: VINF01000002.1 Clostridioides difficile strain Gcol.A28 .cdiff_col_A28.2, whole genome shotgun sequence
⇒Summary: seq-len = 552389 bp; # of CRISPR array = 3; # of cas gene = 8 (type I)
⇒Visulization of predicted CRISPR-Cas system(s)
⇒Cas loci & CRISPR arrays: gff file
⇒Predicted cas genes: protein | gene
⇒CRISPR arrays :
[Locus range 196194-196420 bp]: array | spacers
[Locus range 239972-240330 bp]: array | spacers
[Locus range 350802-352741 bp]: array | spacers
⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)
♦ Seq 5: VINF01000008.1 Clostridioides difficile strain Gcol.A28 .cdiff_col_A28.8, whole genome shotgun sequence
⇒Summary: seq-len = 181349 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)
⇒Visulization of predicted CRISPR-Cas system(s)
⇒Cas loci & CRISPR arrays: gff file
⇒CRISPR arrays :
[Locus range 148457-149147 bp]: array | spacers
⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)
)⇒Visulization of predicted CRISPR-Cas system(s)
[Locus range 148457-149147 bp]: array | spacers