CRISPRone

CRISPRone report for GCA_007559065.1_ASM755906v1

♦ Seq 1: CP041774.1 Pseudomonas aeruginosa strain 60503 chromosome, complete genome

⇒Summary: seq-len = 6809062 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 4450232-4460746 bp Zoom in on locus 1 x10 x12 CRISPR array Location: 4450232-4450810 bp Num of repeats: 10 Spacers: s1-s9 CRISPR array Location: 4450232-4450810 bp Num of repeats: 10 Spacers: s1-s9 Gene: pfam09707:cas2 Type: universal Location: 4450875-4451174 bp Gene: cd09719:cas1 Type: universal Location: 4451171-4452061 bp Gene: pfam08798:cas6e Type: other Location: 4452088-4452627 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 4452674-4453336 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 4453338-4454480 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 4454490-4455020 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 4455017-4456585 bp Gene: cd09641:cas3HD Type: Type-I Location: 4456588-4459269 bp CRISPR array Location: 4460045-4460746 bp Num of repeats: 12 Spacers: s10-s20 CRISPR array Location: 4460045-4460746 bp Num of repeats: 12 Spacers: s10-s20 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 4450232-4450810 bp]: array | spacers
           [Locus range 4460045-4460746 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)