CRISPRone

CRISPRone report for GCA_007559085.1_ASM755908v1

♦ Seq 1: CP041771.1 Pseudomonas aeruginosa strain A681 chromosome, complete genome

⇒Summary: seq-len = 6616247 bp; # of CRISPR array = 3; # of cas gene = 9  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1070165-1080750 bp 2 Locus 2: 1590652-1591281 bp 3 Locus 3: 2945452-2957319 bp Zoom in on locus 1 Zoom in on locus 2 x11 Zoom in on locus 3 x27 x23 Gene: COG0640:csa3 Type: Subtype-I-A Location: 1070165-1071034 bp Gene: pfam00078:RT Type: other Location: 1075943-1077211 bp Gene: unk Type: unknown Location: 1077361-1077759 bp Gene: unk Type: unknown Location: 1077943-1078122 bp Gene: cls000170:cas4 Type: Type-I Location: 1079206-1080750 bp CRISPR array Location: 1590652-1591281 bp Num of repeats: 11 Spacers: s1-s10 CRISPR array Location: 1590652-1591281 bp Num of repeats: 11 Spacers: s1-s10 CRISPR array Location: 2945452-2947037 bp Num of repeats: 27 Spacers: s11-s36 CRISPR array Location: 2945452-2947037 bp Num of repeats: 27 Spacers: s11-s36 Gene: cd09739:cas6f Type: other Location: 2947221-2947784 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 2947788-2948816 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 2948827-2949810 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 2949797-2951098 bp Gene: COG1203:cas3 Type: Type-I Location: 2951509-2954739 bp Gene: cd09718:cas1 Type: universal Location: 2954736-2955710 bp CRISPR array Location: 2955971-2957319 bp Num of repeats: 23 Spacers: s37-s58 CRISPR array Location: 2955971-2957319 bp Num of repeats: 23 Spacers: s37-s58 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 1590652-1591281 bp]: array | spacers
           [Locus range 2945452-2947037 bp]: array | spacers
           [Locus range 2955971-2957319 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)