CRISPRone

CRISPRone report for GCA_007559105.1_ASM755910v1

♦ Seq 1: CP041773.1 Pseudomonas aeruginosa strain 1705-19119 chromosome, complete genome

⇒Summary: seq-len = 6714255 bp; # of CRISPR array = 2; # of cas gene = 13  (type I, IV) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 2164879-2173140 bp 2 Locus 2: 3590986-3601571 bp 3 Locus 3: 5523609-5534830 bp Zoom in on locus 1 Zoom in on locus 2 Zoom in on locus 3 x12 x33 Gene: COG1199:DinG Type: Subtype-IV-A Location: 2164879-2167245 bp Gene: unk Type: unknown Location: 2167638-2168216 bp Gene: unk Type: unknown Location: 2168360-2168515 bp Gene: COG2378:WYL Type: other Location: 2168769-2169611 bp Gene: pfam13280:WYL Type: other Location: 2170599-2171369 bp Gene: mkCas0115:csx3 Type: other Location: 2171530-2173140 bp Gene: COG0640:csa3 Type: Subtype-I-A Location: 3590986-3591855 bp Gene: pfam00078:RT Type: other Location: 3596764-3598032 bp Gene: unk Type: unknown Location: 3598182-3598580 bp Gene: unk Type: unknown Location: 3598764-3598943 bp Gene: cls000170:cas4 Type: Type-I Location: 3600027-3601571 bp CRISPR array Location: 5523609-5524297 bp Num of repeats: 12 Spacers: s1-s11 CRISPR array Location: 5523609-5524297 bp Num of repeats: 12 Spacers: s1-s11 Gene: cd09739:cas6f Type: other Location: 5524481-5525044 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 5525048-5526076 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 5526087-5527070 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 5527057-5528361 bp Gene: COG1203:cas3 Type: Type-I Location: 5528419-5531649 bp Gene: cd09718:cas1 Type: universal Location: 5531646-5532620 bp CRISPR array Location: 5532882-5534830 bp Num of repeats: 33 Spacers: s12-s43 CRISPR array Location: 5532882-5534830 bp Num of repeats: 33 Spacers: s12-s43 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 5523609-5524297 bp]: array | spacers
           [Locus range 5532882-5534830 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)