CRISPRone

CRISPRone report for GCA_007860265.1_ASM786026v1

♦ Seq 1: SZXO01000021.1 Pseudomonas aeruginosa strain SF2, whole genome shotgun sequence

⇒Summary: seq-len = 97301 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 33350-44035 bp Zoom in on locus 1 x22 x13 CRISPR array Location: 33350-34639 bp Num of repeats: 22 Spacers: s1-s21 CRISPR array Location: 33350-34639 bp Num of repeats: 22 Spacers: s1-s21 Gene: cd09718:cas1 Type: universal Location: 34899-35873 bp Gene: COG1203:cas3 Type: Type-I Location: 35870-39100 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 39158-40462 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 40449-41432 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 41443-42471 bp Gene: cd09739:cas6f Type: other Location: 42475-43038 bp CRISPR array Location: 43288-44035 bp Num of repeats: 13 Spacers: s22-s33 CRISPR array Location: 43288-44035 bp Num of repeats: 13 Spacers: s22-s33 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 33350-34639 bp]: array | spacers
           [Locus range 43288-44035 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)