CRISPRone

CRISPRone report for GCA_007860305.1_ASM786030v1

♦ Seq 1: SZXP01000023.1 Pseudomonas aeruginosa strain SF3, whole genome shotgun sequence

⇒Summary: seq-len = 89719 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 25769-36454 bp Zoom in on locus 1 x22 x13 CRISPR array Location: 25769-27058 bp Num of repeats: 22 Spacers: s1-s21 CRISPR array Location: 25769-27058 bp Num of repeats: 22 Spacers: s1-s21 Gene: cd09718:cas1 Type: universal Location: 27318-28292 bp Gene: COG1203:cas3 Type: Type-I Location: 28289-31519 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 31577-32881 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 32868-33851 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 33862-34890 bp Gene: cd09739:cas6f Type: other Location: 34894-35457 bp CRISPR array Location: 35707-36454 bp Num of repeats: 13 Spacers: s22-s33 CRISPR array Location: 35707-36454 bp Num of repeats: 13 Spacers: s22-s33 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 25769-27058 bp]: array | spacers
           [Locus range 35707-36454 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)