CRISPRone

CRISPRone report for GCA_007896595.1_ASM789659v1

♦ Seq 1: VOHY01000034.1 Bacteroides fragilis strain CFPLTA004_1B NODE_34_length_32627_cov_74.172523, whole genome shotgun sequence

⇒Summary: seq-len = 32627 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 19152-22765 bp Zoom in on locus 1 Gene: cd09692:cas5 Type: Subtype-I-B Location: 19152-19820 bp Gene: unk Type: unknown Location: 19823-20596 bp Gene: unk Type: unknown Location: 20604-21869 bp Gene: pfam13280:WYL Type: other Location: 21866-22765 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: VOHY01000007.1 Bacteroides fragilis strain CFPLTA004_1B NODE_7_length_199068_cov_73.092525, whole genome shotgun sequence

⇒Summary: seq-len = 199068 bp; # of CRISPR array = 1; # of cas gene = 3  (type II) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 190487-197754 bp Zoom in on locus 1 x6 antiRepeat Location: 190487-190532 bp Strand: + Match length: 26 bp Mismatch: 21 bp Gene: cd09643:cas9 Type: Subtype-II-C Location: 190600-194910 bp Gene: unk Type: unknown Location: 194926-195450 bp Gene: unk Type: unknown Location: 195517-195825 bp Gene: cd09720:cas1 Type: Subtype-II-C Location: 195945-196877 bp Gene: pfam09827:cas2 Type: Subtype-II-C Location: 196881-197213 bp CRISPR array Location: 197323-197754 bp Num of repeats: 6 Spacers: s1-s5 CRISPR array Location: 197323-197754 bp Num of repeats: 6 Spacers: s1-s5 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 197323-197754 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: VOHY01000021.1 Bacteroides fragilis strain CFPLTA004_1B NODE_21_length_113086_cov_65.159332, whole genome shotgun sequence

⇒Summary: seq-len = 113086 bp; # of CRISPR array = 1; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 17187-26364 bp Zoom in on locus 1 x21 Gene: cd09652:cas6 Type: other Location: 17187-17858 bp Gene: mkCas0069:cas5 Type: Subtype-I-B Location: 17870-18433 bp Gene: COG1203:cas3 Type: Type-I Location: 18423-20582 bp Gene: mkCas0111:cas8b6 Type: Subtype-I-B Location: 20586-21911 bp Gene: mkCas0088:cas7 Type: Subtype-I-B Location: 21924-22982 bp Gene: pfam01930:cas4 Type: Type-I Location: 23047-23559 bp Gene: cd09722:cas1 Type: universal Location: 23556-24569 bp Gene: cd09725:cas2 Type: universal Location: 24572-24835 bp CRISPR array Location: 25048-26364 bp Num of repeats: 21 Spacers: s1-s20 CRISPR array Location: 25048-26364 bp Num of repeats: 21 Spacers: s1-s20 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 25048-26364 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)