CRISPRone

CRISPRone report for GCA_007896795.1_ASM789679v1

♦ Seq 1: VOHX01000001.1 Bacteroides fragilis strain TL139C_1B NODE_1_length_1573133_cov_65.111222, whole genome shotgun sequence

⇒Summary: seq-len = 1573133 bp; # of CRISPR array = 2; # of cas gene = 10  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 458926-459031 bp 2 Locus 2: 1066372-1080875 bp Zoom in on locus 1 x2 Zoom in on locus 2 x13 CRISPR array Location: 458926-459031 bp Num of repeats: 2 Spacers: s1-s1 CRISPR array Location: 458926-459031 bp Num of repeats: 2 Spacers: s1-s1 Gene: cls000004:cas6 Type: other Location: 1066372-1067040 bp Gene: unk Type: unknown Location: 1067058-1067684 bp Gene: unk Type: unknown Location: 1067660-1068439 bp Gene: cash17:cash17 Type: Type- Location: 1068484-1069911 bp Gene: unk Type: unknown Location: 1069908-1070387 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 1070401-1071810 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 1071815-1073617 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 1073610-1074749 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 1074769-1075608 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 1075621-1076031 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 1076034-1076978 bp Gene: cd09634:cas1 Type: universal Location: 1076998-1079268 bp Gene: cd09725:cas2 Type: universal Location: 1079262-1079552 bp CRISPR array Location: 1080000-1080875 bp Num of repeats: 13 Spacers: s2-s13 CRISPR array Location: 1080000-1080875 bp Num of repeats: 13 Spacers: s2-s13 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 458926-459031 bp]: array | spacers
           [Locus range 1080000-1080875 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: VOHX01000004.1 Bacteroides fragilis strain TL139C_1B NODE_4_length_527045_cov_69.218275, whole genome shotgun sequence

⇒Summary: seq-len = 527045 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 126316-129929 bp Zoom in on locus 1 Gene: cd09692:cas5 Type: Subtype-I-B Location: 126316-126984 bp Gene: unk Type: unknown Location: 126987-127760 bp Gene: unk Type: unknown Location: 127768-129033 bp Gene: pfam13280:WYL Type: other Location: 129030-129929 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)