CRISPRone

CRISPRone report for GCA_007922895.1_ASM792289v1

♦ Seq 1: VOJC01000047.1 Pseudomonas aeruginosa strain 6487 NODE_47_length_48322_cov_18.839092, whole genome shotgun sequence

⇒Summary: seq-len = 48322 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 132-10739 bp Zoom in on locus 1 x17 x18 CRISPR array Location: 132-1109 bp Num of repeats: 17 Spacers: s1-s16 CRISPR array Location: 132-1109 bp Num of repeats: 17 Spacers: s1-s16 Gene: cd09718:cas1 Type: universal Location: 1369-2343 bp Gene: COG1203:cas3 Type: Type-I Location: 2340-5570 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 5628-6932 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 6919-7902 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 7913-8941 bp Gene: cd09739:cas6f Type: other Location: 8945-9508 bp CRISPR array Location: 9692-10739 bp Num of repeats: 18 Spacers: s17-s33 CRISPR array Location: 9692-10739 bp Num of repeats: 18 Spacers: s17-s33 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 132-1109 bp]: array | spacers
           [Locus range 9692-10739 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: VOJC01000008.1 Pseudomonas aeruginosa strain 6487 NODE_8_length_167237_cov_13.996022, whole genome shotgun sequence

⇒Summary: seq-len = 167237 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 677-1245 bp Zoom in on locus 1 x10 CRISPR array Location: 677-1245 bp Num of repeats: 10 Spacers: s1-s9 CRISPR array Location: 677-1245 bp Num of repeats: 10 Spacers: s1-s9 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 677-1245 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)