CRISPRone

CRISPRone report for GCA_007922925.1_ASM792292v1

♦ Seq 1: VOJE01000038.1 Pseudomonas aeruginosa strain 6436 NODE_38_length_68829_cov_21.729390, whole genome shotgun sequence

⇒Summary: seq-len = 68829 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 21830-32274 bp Zoom in on locus 1 x19 x12 CRISPR array Location: 21830-22938 bp Num of repeats: 19 Spacers: s1-s18 CRISPR array Location: 21830-22938 bp Num of repeats: 19 Spacers: s1-s18 Gene: cd09718:cas1 Type: universal Location: 23198-24172 bp Gene: COG1203:cas3 Type: Type-I Location: 24169-27399 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 27457-28761 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 28748-29731 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 29742-30770 bp Gene: cd09739:cas6f Type: other Location: 30774-31337 bp CRISPR array Location: 31587-32274 bp Num of repeats: 12 Spacers: s19-s29 CRISPR array Location: 31587-32274 bp Num of repeats: 12 Spacers: s19-s29 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 21830-22938 bp]: array | spacers
           [Locus range 31587-32274 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)