CRISPRone

CRISPRone report for GCA_008033745.1_ASM803374v1

♦ Seq 1: CP028849.1 Pseudomonas aeruginosa strain IMP68 chromosome, complete genome

⇒Summary: seq-len = 6481697 bp; # of CRISPR array = 3; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 2843351-2855680 bp Zoom in on locus 1 x7 x12 x24 CRISPR array Location: 2843351-2843739 bp Num of repeats: 7 Spacers: s1-s6 CRISPR array Location: 2843351-2843739 bp Num of repeats: 7 Spacers: s1-s6 CRISPR array Location: 2845010-2845698 bp Num of repeats: 12 Spacers: s7-s17 CRISPR array Location: 2845010-2845698 bp Num of repeats: 12 Spacers: s7-s17 Gene: cd09739:cas6f Type: other Location: 2845882-2846445 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 2846449-2847477 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 2847488-2848471 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 2848458-2849762 bp Gene: COG1203:cas3 Type: Type-I Location: 2849820-2853050 bp Gene: cd09718:cas1 Type: universal Location: 2853047-2854021 bp CRISPR array Location: 2854273-2855680 bp Num of repeats: 24 Spacers: s18-s40 CRISPR array Location: 2854273-2855680 bp Num of repeats: 24 Spacers: s18-s40 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 2843351-2843739 bp]: array | spacers
           [Locus range 2845010-2845698 bp]: array | spacers
           [Locus range 2854273-2855680 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)