CRISPRone

CRISPRone report for GCA_008033765.1_ASM803376v1

♦ Seq 1: CP028959.1 Pseudomonas aeruginosa strain IMP66 chromosome, complete genome

⇒Summary: seq-len = 6486336 bp; # of CRISPR array = 3; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 2858268-2870597 bp Zoom in on locus 1 x7 x12 x24 CRISPR array Location: 2858268-2858656 bp Num of repeats: 7 Spacers: s1-s6 CRISPR array Location: 2858268-2858656 bp Num of repeats: 7 Spacers: s1-s6 CRISPR array Location: 2859927-2860615 bp Num of repeats: 12 Spacers: s7-s17 CRISPR array Location: 2859927-2860615 bp Num of repeats: 12 Spacers: s7-s17 Gene: cd09739:cas6f Type: other Location: 2860799-2861362 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 2861366-2862394 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 2862405-2863388 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 2863375-2864679 bp Gene: COG1203:cas3 Type: Type-I Location: 2864737-2867967 bp Gene: cd09718:cas1 Type: universal Location: 2867964-2868938 bp CRISPR array Location: 2869190-2870597 bp Num of repeats: 24 Spacers: s18-s40 CRISPR array Location: 2869190-2870597 bp Num of repeats: 24 Spacers: s18-s40 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 2858268-2858656 bp]: array | spacers
           [Locus range 2859927-2860615 bp]: array | spacers
           [Locus range 2869190-2870597 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)