CRISPRone

CRISPRone report for GCA_008195485.1_ASM819548v1

♦ Seq 1: CP043328.1 Pseudomonas aeruginosa strain CCUG 51971 chromosome, complete genome

⇒Summary: seq-len = 7012798 bp; # of CRISPR array = 1; # of cas gene = 10  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 5271612-5278400 bp 2 Locus 2: 5683715-5692862 bp Zoom in on locus 1 Zoom in on locus 2 x21 Gene: cd09696:cas3 Type: Subtype-I-U Location: 5271612-5274833 bp Gene: pfam13280:WYL Type: other Location: 5274846-5275754 bp Gene: unk Type: unknown Location: 5276034-5276924 bp Gene: mkCas0115:csx3 Type: other Location: 5277369-5278400 bp CRISPR array Location: 5683715-5685070 bp Num of repeats: 21 Spacers: s1-s20 CRISPR array Location: 5683715-5685070 bp Num of repeats: 21 Spacers: s1-s20 Gene: cd09725:cas2 Type: universal Location: 5685252-5685542 bp Gene: cd09721:cas1 Type: universal Location: 5685552-5686592 bp Gene: pfam01930:cas4 Type: Type-I Location: 5686596-5687228 bp Gene: cd09689:cas7 Type: Subtype-I-C Location: 5687247-5688116 bp Gene: cd09757:cas8c Type: Subtype-I-C Location: 5688113-5689906 bp Gene: cd09752:cas5 Type: Subtype-I-C Location: 5689903-5690577 bp Gene: cd09641:cas3HD Type: Type-I Location: 5690628-5692862 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 5683715-5685070 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)