CRISPRone

CRISPRone report for GCA_008245185.1_ASM824518v1

♦ Seq 1: CP042269.1 Pseudomonas aeruginosa strain HOU1 chromosome, complete genome

⇒Summary: seq-len = 6123373 bp; # of CRISPR array = 3; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1555802-1557452 bp 2 Locus 2: 2692202-2702464 bp Zoom in on locus 1 x28 Zoom in on locus 2 x18 x11 CRISPR array Location: 1555802-1557452 bp Num of repeats: 28 Spacers: s1-s27 CRISPR array Location: 1555802-1557452 bp Num of repeats: 28 Spacers: s1-s27 CRISPR array Location: 2692202-2693251 bp Num of repeats: 18 Spacers: s28-s44 CRISPR array Location: 2692202-2693251 bp Num of repeats: 18 Spacers: s28-s44 Gene: cd09739:cas6f Type: other Location: 2693436-2693999 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 2694003-2695031 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 2695042-2696025 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 2696012-2697316 bp Gene: COG1203:cas3 Type: Type-I Location: 2697374-2700604 bp Gene: cd09718:cas1 Type: universal Location: 2700601-2701575 bp CRISPR array Location: 2701836-2702464 bp Num of repeats: 11 Spacers: s45-s54 CRISPR array Location: 2701836-2702464 bp Num of repeats: 11 Spacers: s45-s54 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 1555802-1557452 bp]: array | spacers
           [Locus range 2692202-2693251 bp]: array | spacers
           [Locus range 2701836-2702464 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)