CRISPRone

CRISPRone report for GCA_008386455.1_ASM838645v1

♦ Seq 1: VUNV01000015.1 Pseudomonas aeruginosa strain PAE006 NODE_15_length_184258_cov_25.834743, whole genome shotgun sequence

⇒Summary: seq-len = 184258 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 8906-11242 bp Zoom in on locus 1 Gene: cd06127:DEDDh Type: Type-I Location: 8906-9535 bp Gene: unk Type: unknown Location: 9624-10178 bp Gene: mkCas0131:cas8b5 Type: Subtype-I-B Location: 10226-11242 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: VUNV01000043.1 Pseudomonas aeruginosa strain PAE006 NODE_43_length_30674_cov_25.695453, whole genome shotgun sequence

⇒Summary: seq-len = 30674 bp; # of CRISPR array = 1; # of cas gene = 6  (type I, IV) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 15529-22099 bp Zoom in on locus 1 x14 Gene: pfam03787:csm3gr7 Type: Type-III Location: 15529-16629 bp Gene: pfam09618:cas6f Type: Subtype-I-F Location: 16617-17171 bp Gene: COG1199:DinG Type: Subtype-IV-A Location: 17185-19398 bp Gene: mkCas0093:csf3gr5 Type: Subtype-IV-A Location: 19398-20078 bp Gene: COG1518:cas1 Type: universal Location: 20083-20952 bp Gene: cd09673:cas3f Type: Subtype-I-F Location: 20933-21268 bp CRISPR array Location: 21292-22099 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 21292-22099 bp Num of repeats: 14 Spacers: s1-s13 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 21292-22099 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)