CRISPRone

CRISPRone report for GCA_008629875.1_ASM862987v1

♦ Seq 1: VWQF01000019.1 Pseudomonas aeruginosa strain L31 L31_L1.R1.clean_(paired)_contig_19, whole genome shotgun sequence

⇒Summary: seq-len = 97900 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 66637-78696 bp Zoom in on locus 1 x19 x40 CRISPR array Location: 66637-67745 bp Num of repeats: 19 Spacers: s1-s18 CRISPR array Location: 66637-67745 bp Num of repeats: 19 Spacers: s1-s18 Gene: cd09739:cas6f Type: other Location: 67928-68491 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 68495-69523 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 69534-70517 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 70504-71808 bp Gene: COG1203:cas3 Type: Type-I Location: 71866-75096 bp Gene: cd09718:cas1 Type: universal Location: 75093-76067 bp CRISPR array Location: 76329-78696 bp Num of repeats: 40 Spacers: s19-s57 CRISPR array Location: 76329-78696 bp Num of repeats: 40 Spacers: s19-s57 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 66637-67745 bp]: array | spacers
           [Locus range 76329-78696 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)