CRISPRone

CRISPRone report for GCA_008802455.1_ASM880245v1

♦ Seq 1: VZIJ01000002.1 Pseudomonas aeruginosa strain KCJ3K27 NODE_2_length_173094_cov_5.649396, whole genome shotgun sequence

⇒Summary: seq-len = 173094 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 38279-49970 bp Zoom in on locus 1 x24 x23 CRISPR array Location: 38279-39688 bp Num of repeats: 24 Spacers: s1-s23 CRISPR array Location: 38279-39688 bp Num of repeats: 24 Spacers: s1-s23 Gene: cd09739:cas6f Type: other Location: 39872-40435 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 40439-41467 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 41478-42461 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 42448-43749 bp Gene: COG1203:cas3 Type: Type-I Location: 44160-47390 bp Gene: cd09718:cas1 Type: universal Location: 47387-48361 bp CRISPR array Location: 48622-49970 bp Num of repeats: 23 Spacers: s24-s45 CRISPR array Location: 48622-49970 bp Num of repeats: 23 Spacers: s24-s45 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 38279-39688 bp]: array | spacers
           [Locus range 48622-49970 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)