CRISPRone

CRISPRone report for GCA_008802515.1_ASM880251v1

♦ Seq 1: VZIP01000170.1 Pseudomonas aeruginosa strain KCJ3K57 NODE_170_length_13412_cov_3.102672, whole genome shotgun sequence

⇒Summary: seq-len = 13412 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 0-10377 bp Zoom in on locus 1 x13 x17 CRISPR array Location: 0-741 bp Num of repeats: 13 Spacers: s1-s12 CRISPR array Location: 0-741 bp Num of repeats: 13 Spacers: s1-s12 Gene: cd09718:cas1 Type: universal Location: 1001-1975 bp Gene: COG1203:cas3 Type: Type-I Location: 1972-5202 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 5260-6564 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 6551-7534 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 7545-8573 bp Gene: cd09739:cas6f Type: other Location: 8577-9140 bp CRISPR array Location: 9390-10377 bp Num of repeats: 17 Spacers: s13-s28 CRISPR array Location: 9390-10377 bp Num of repeats: 17 Spacers: s13-s28 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 0-741 bp]: array | spacers
           [Locus range 9390-10377 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)