CRISPRone

CRISPRone report for GCA_008802595.1_ASM880259v1

♦ Seq 1: VZIT01000108.1 Pseudomonas aeruginosa strain KCJ3K95 NODE_108_length_18921_cov_5.269128, whole genome shotgun sequence

⇒Summary: seq-len = 18921 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 365-11037 bp Zoom in on locus 1 x17 x19 CRISPR array Location: 365-1354 bp Num of repeats: 17 Spacers: s1-s16 CRISPR array Location: 365-1354 bp Num of repeats: 17 Spacers: s1-s16 Gene: cd09718:cas1 Type: universal Location: 1605-2579 bp Gene: COG1203:cas3 Type: Type-I Location: 2576-5806 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 5864-7168 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 7155-8138 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 8149-9177 bp Gene: cd09739:cas6f Type: other Location: 9181-9744 bp CRISPR array Location: 9928-11037 bp Num of repeats: 19 Spacers: s17-s34 CRISPR array Location: 9928-11037 bp Num of repeats: 19 Spacers: s17-s34 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 365-1354 bp]: array | spacers
           [Locus range 9928-11037 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: VZIT01000008.1 Pseudomonas aeruginosa strain KCJ3K95 NODE_8_length_104235_cov_5.803915, whole genome shotgun sequence

⇒Summary: seq-len = 104235 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 102912-103720 bp Zoom in on locus 1 x14 CRISPR array Location: 102912-103720 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 102912-103720 bp Num of repeats: 14 Spacers: s1-s13 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 102912-103720 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)