CRISPRone

CRISPRone report for GCA_008843075.1_ASM884307v1

♦ Seq 1: WBZE01000001.1 Pseudomonas aeruginosa strain MUC-P5, whole genome shotgun sequence

⇒Summary: seq-len = 660910 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 199858-210369 bp Zoom in on locus 1 x13 x9 CRISPR array Location: 199858-200618 bp Num of repeats: 13 Spacers: s1-s12 CRISPR array Location: 199858-200618 bp Num of repeats: 13 Spacers: s1-s12 Gene: pfam09707:cas2 Type: universal Location: 200683-200982 bp Gene: cd09719:cas1 Type: universal Location: 200979-201869 bp Gene: pfam08798:cas6e Type: other Location: 201896-202435 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 202482-203144 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 203146-204288 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 204298-204828 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 204825-206393 bp Gene: cd09641:cas3HD Type: Type-I Location: 206396-209077 bp CRISPR array Location: 209853-210369 bp Num of repeats: 9 Spacers: s13-s20 CRISPR array Location: 209853-210369 bp Num of repeats: 9 Spacers: s13-s20 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 199858-200618 bp]: array | spacers
           [Locus range 209853-210369 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)