CRISPRone

CRISPRone report for GCA_009025705.1_ASM902570v1

♦ Seq 1: WCIE01000001.1 Bacteroides fragilis strain HAP130N_3B NODE_1_length_987079_cov_74.543214, whole genome shotgun sequence

⇒Summary: seq-len = 987079 bp; # of CRISPR array = 1; # of cas gene = 10  (type III) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 375518-390362 bp Zoom in on locus 1 x18 CRISPR array Location: 375518-376734 bp Num of repeats: 18 Spacers: s1-s17 CRISPR array Location: 375518-376734 bp Num of repeats: 18 Spacers: s1-s17 Gene: cd09725:cas2 Type: universal Location: 377182-377472 bp Gene: cd09634:cas1 Type: universal Location: 377466-379736 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 379756-380700 bp Gene: mkCas0098:cmr5gr11 Type: Subtype-III-B Location: 380703-381113 bp Gene: pfam03787:csm3gr7 Type: Type-III Location: 381126-381965 bp Gene: pfam09700:cmr3gr5 Type: Subtype-III-B Location: 381985-383124 bp Gene: pfam12469:cas10 Type: Subtype-III-B Location: 383117-384919 bp Gene: mkCas0086:cmr1gr7 Type: Subtype-III-B Location: 384924-386333 bp Gene: unk Type: unknown Location: 386347-386826 bp Gene: cash17:cash17 Type: Type- Location: 386823-388250 bp Gene: unk Type: unknown Location: 388295-389074 bp Gene: unk Type: unknown Location: 389050-389676 bp Gene: cls000004:cas6 Type: other Location: 389694-390362 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 375518-376734 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: WCIE01000009.1 Bacteroides fragilis strain HAP130N_3B NODE_9_length_218271_cov_82.335549, whole genome shotgun sequence

⇒Summary: seq-len = 218271 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 112595-116208 bp Zoom in on locus 1 Gene: cd09692:cas5 Type: Subtype-I-B Location: 112595-113263 bp Gene: unk Type: unknown Location: 113266-114039 bp Gene: unk Type: unknown Location: 114047-115312 bp Gene: pfam13280:WYL Type: other Location: 115309-116208 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)