CRISPRone

CRISPRone report for GCA_009025735.1_ASM902573v1

♦ Seq 1: WCHY01000091.1 Pseudomonas aeruginosa strain GO79 NODE_91_length_7278_cov_4.117186, whole genome shotgun sequence

⇒Summary: seq-len = 7278 bp; # of CRISPR array = 1; # of cas gene = 4  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 344-7276 bp Zoom in on locus 1 x8 CRISPR array Location: 344-792 bp Num of repeats: 8 Spacers: s1-s7 CRISPR array Location: 344-792 bp Num of repeats: 8 Spacers: s1-s7 Gene: cd09718:cas1 Type: universal Location: 1052-2026 bp Gene: COG1203:cas3 Type: Type-I Location: 2023-5262 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 5320-6624 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 6611-7276 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 344-792 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: WCHY01000053.1 Pseudomonas aeruginosa strain GO79 NODE_53_length_39497_cov_7.687376, whole genome shotgun sequence

⇒Summary: seq-len = 39497 bp; # of CRISPR array = 1; # of cas gene = 2  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 3-1974 bp Zoom in on locus 1 x9 Gene: pfam09615:cas7f Type: Subtype-I-F Location: 3-716 bp Gene: cd09739:cas6f Type: other Location: 720-1283 bp CRISPR array Location: 1467-1974 bp Num of repeats: 9 Spacers: s1-s8 CRISPR array Location: 1467-1974 bp Num of repeats: 9 Spacers: s1-s8 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 1467-1974 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: WCHY01000033.1 Pseudomonas aeruginosa strain GO79 NODE_33_length_73753_cov_6.892402, whole genome shotgun sequence

⇒Summary: seq-len = 73753 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 345-853 bp Zoom in on locus 1 x9 CRISPR array Location: 345-853 bp Num of repeats: 9 Spacers: s1-s8 CRISPR array Location: 345-853 bp Num of repeats: 9 Spacers: s1-s8 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 345-853 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)