CRISPRone

CRISPRone report for GCA_009299595.1_ASM929959v1

♦ Seq 1: VMNN01000098.1 Pseudomonas aeruginosa strain PA16 NODE_98_length_25269_cov_34.013576, whole genome shotgun sequence

⇒Summary: seq-len = 25269 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 24774-25282 bp Zoom in on locus 1 x9 CRISPR array Location: 24774-25282 bp Num of repeats: 9 Spacers: s1-s8 CRISPR array Location: 24774-25282 bp Num of repeats: 9 Spacers: s1-s8 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 24774-25282 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: VMNN01000313.1 Pseudomonas aeruginosa strain PA16 NODE_313_length_922_cov_50.756213, whole genome shotgun sequence

⇒Summary: seq-len = 922 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 0-921 bp Zoom in on locus 1 x16 CRISPR array Location: 0-921 bp Num of repeats: 16 Spacers: s1-s15 CRISPR array Location: 0-921 bp Num of repeats: 16 Spacers: s1-s15 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 0-921 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: VMNN01000011.1 Pseudomonas aeruginosa strain PA16 NODE_11_length_83389_cov_35.681643, whole genome shotgun sequence

⇒Summary: seq-len = 83389 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 74157-75085 bp Zoom in on locus 1 x16 CRISPR array Location: 74157-75085 bp Num of repeats: 16 Spacers: s1-s15 CRISPR array Location: 74157-75085 bp Num of repeats: 16 Spacers: s1-s15 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 74157-75085 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: VMNN01000046.1 Pseudomonas aeruginosa strain PA16 NODE_46_length_44735_cov_34.468695, whole genome shotgun sequence

⇒Summary: seq-len = 44735 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 0-436 bp Zoom in on locus 1 x8 CRISPR array Location: 0-436 bp Num of repeats: 8 Spacers: s1-s7 CRISPR array Location: 0-436 bp Num of repeats: 8 Spacers: s1-s7 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 0-436 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: VMNN01000300.1 Pseudomonas aeruginosa strain PA16 NODE_300_length_1365_cov_49.248447, whole genome shotgun sequence

⇒Summary: seq-len = 1309 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 20-1308 bp Zoom in on locus 1 x22 CRISPR array Location: 20-1308 bp Num of repeats: 22 Spacers: s1-s21 CRISPR array Location: 20-1308 bp Num of repeats: 22 Spacers: s1-s21 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 20-1308 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: VMNN01000208.1 Pseudomonas aeruginosa strain PA16 NODE_208_length_7543_cov_38.416287, whole genome shotgun sequence

⇒Summary: seq-len = 7543 bp; # of CRISPR array = 1; # of cas gene = 5  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 110-7550 bp Zoom in on locus 1 x2 Gene: COG1203:cas3 Type: Type-I Location: 110-3340 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 3398-4702 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 4689-5672 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 5683-6711 bp Gene: cd09739:cas6f Type: other Location: 6715-7278 bp CRISPR array Location: 7463-7550 bp Num of repeats: 2 Spacers: s1-s1 CRISPR array Location: 7463-7550 bp Num of repeats: 2 Spacers: s1-s1 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 7463-7550 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: VMNN01000308.1 Pseudomonas aeruginosa strain PA16 NODE_308_length_1150_cov_35.973905, whole genome shotgun sequence

⇒Summary: seq-len = 1097 bp; # of CRISPR array = 0; # of cas gene = 1  NA .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 159-1094 bp Zoom in on locus 1 Gene: cd09718:cas1 Type: universal Location: 159-1094 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)