CRISPRone

CRISPRone report for GCA_009676785.1_ASM967678v1

♦ Seq 1: CP046060.1 Pseudomonas aeruginosa strain 1811-18R001 chromosome, complete genome

⇒Summary: seq-len = 7343000 bp; # of CRISPR array = 2; # of cas gene = 11  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1228977-1239562 bp 2 Locus 2: 4793480-4803991 bp Zoom in on locus 1 Zoom in on locus 2 x13 x9 Gene: COG0640:csa3 Type: Subtype-I-A Location: 1228977-1229846 bp Gene: pfam00078:RT Type: other Location: 1234755-1236023 bp Gene: unk Type: unknown Location: 1236173-1236571 bp Gene: unk Type: unknown Location: 1236755-1236934 bp Gene: cls000170:cas4 Type: Type-I Location: 1238018-1239562 bp CRISPR array Location: 4793480-4794241 bp Num of repeats: 13 Spacers: s1-s12 CRISPR array Location: 4793480-4794241 bp Num of repeats: 13 Spacers: s1-s12 Gene: pfam09707:cas2 Type: universal Location: 4794306-4794605 bp Gene: cd09719:cas1 Type: universal Location: 4794602-4795492 bp Gene: pfam08798:cas6e Type: other Location: 4795519-4796058 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 4796105-4796767 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 4796769-4797911 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 4797921-4798451 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 4798448-4800016 bp Gene: cd09641:cas3HD Type: Type-I Location: 4800019-4802700 bp CRISPR array Location: 4803474-4803991 bp Num of repeats: 9 Spacers: s13-s20 CRISPR array Location: 4803474-4803991 bp Num of repeats: 9 Spacers: s13-s20 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 4793480-4794241 bp]: array | spacers
           [Locus range 4803474-4803991 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)