CRISPRone

CRISPRone report for GCA_009727235.1_ASM972723v1

♦ Seq 1: WOAG01000010.1 Pseudomonas aeruginosa strain PA218 NODE_10_length_112480_cov_27.521499, whole genome shotgun sequence

⇒Summary: seq-len = 112480 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 71308-82350 bp Zoom in on locus 1 x22 x20 CRISPR array Location: 71308-72597 bp Num of repeats: 22 Spacers: s1-s21 CRISPR array Location: 71308-72597 bp Num of repeats: 22 Spacers: s1-s21 Gene: cd09739:cas6f Type: other Location: 72781-73344 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 73348-74376 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 74387-75370 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 75357-76661 bp Gene: COG1203:cas3 Type: Type-I Location: 76719-79949 bp Gene: cd09718:cas1 Type: universal Location: 79946-80920 bp CRISPR array Location: 81181-82350 bp Num of repeats: 20 Spacers: s22-s40 CRISPR array Location: 81181-82350 bp Num of repeats: 20 Spacers: s22-s40 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 71308-72597 bp]: array | spacers
           [Locus range 81181-82350 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: WOAG01000001.1 Pseudomonas aeruginosa strain PA218 NODE_1_length_1839574_cov_27.921250, whole genome shotgun sequence

⇒Summary: seq-len = 1839574 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1223470-1224579 bp Zoom in on locus 1 x19 CRISPR array Location: 1223470-1224579 bp Num of repeats: 19 Spacers: s1-s18 CRISPR array Location: 1223470-1224579 bp Num of repeats: 19 Spacers: s1-s18 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 1223470-1224579 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)