CRISPRone

CRISPRone report for GCA_009727425.1_ASM972742v1

♦ Seq 1: WOAQ01000025.1 Pseudomonas aeruginosa strain PA181 NODE_25_length_75882_cov_17.797584, whole genome shotgun sequence

⇒Summary: seq-len = 75882 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 36558-48257 bp Zoom in on locus 1 x17 x36 CRISPR array Location: 36558-37546 bp Num of repeats: 17 Spacers: s1-s16 CRISPR array Location: 36558-37546 bp Num of repeats: 17 Spacers: s1-s16 Gene: cd09739:cas6f Type: other Location: 37729-38292 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 38296-39324 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 39335-40318 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 40305-41609 bp Gene: COG1203:cas3 Type: Type-I Location: 41667-44897 bp Gene: cd09718:cas1 Type: universal Location: 44894-45868 bp CRISPR array Location: 46130-48257 bp Num of repeats: 36 Spacers: s17-s51 CRISPR array Location: 46130-48257 bp Num of repeats: 36 Spacers: s17-s51 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 36558-37546 bp]: array | spacers
           [Locus range 46130-48257 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)