CRISPRone

CRISPRone report for GCA_009727505.1_ASM972750v1

♦ Seq 1: WOAW01000001.1 Pseudomonas aeruginosa strain PA123 NODE_1_length_934336_cov_26.351985, whole genome shotgun sequence

⇒Summary: seq-len = 934336 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 452872-463079 bp Zoom in on locus 1 x9 x8 CRISPR array Location: 452872-453389 bp Num of repeats: 9 Spacers: s1-s8 CRISPR array Location: 452872-453389 bp Num of repeats: 9 Spacers: s1-s8 Gene: cd09641:cas3HD Type: Type-I Location: 454163-456844 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 456847-458415 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 458412-458942 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 458952-460094 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 460096-460758 bp Gene: pfam08798:cas6e Type: other Location: 460733-461344 bp Gene: cd09719:cas1 Type: universal Location: 461371-462261 bp Gene: pfam09707:cas2 Type: universal Location: 462258-462557 bp CRISPR array Location: 462622-463079 bp Num of repeats: 8 Spacers: s9-s15 CRISPR array Location: 462622-463079 bp Num of repeats: 8 Spacers: s9-s15 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 452872-453389 bp]: array | spacers
           [Locus range 462622-463079 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)