CRISPRone

CRISPRone report for GCA_009737225.1_ASM973722v1

♦ Seq 1: WOVI01000050.1 Pseudomonas aeruginosa strain MZ4A NODE_50_length_47737_cov_8.8747, whole genome shotgun sequence

⇒Summary: seq-len = 47737 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 168-11210 bp Zoom in on locus 1 x20 x22 CRISPR array Location: 168-1338 bp Num of repeats: 20 Spacers: s1-s19 CRISPR array Location: 168-1338 bp Num of repeats: 20 Spacers: s1-s19 Gene: cd09718:cas1 Type: universal Location: 1598-2572 bp Gene: COG1203:cas3 Type: Type-I Location: 2569-5799 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 5857-7161 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 7148-8131 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 8142-9170 bp Gene: cd09739:cas6f Type: other Location: 9174-9737 bp CRISPR array Location: 9922-11210 bp Num of repeats: 22 Spacers: s20-s40 CRISPR array Location: 9922-11210 bp Num of repeats: 22 Spacers: s20-s40 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 168-1338 bp]: array | spacers
           [Locus range 9922-11210 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: WOVI01000021.1 Pseudomonas aeruginosa strain MZ4A NODE_21_length_102938_cov_10.7859, whole genome shotgun sequence

⇒Summary: seq-len = 102938 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 101662-102771 bp Zoom in on locus 1 x19 CRISPR array Location: 101662-102771 bp Num of repeats: 19 Spacers: s1-s18 CRISPR array Location: 101662-102771 bp Num of repeats: 19 Spacers: s1-s18 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 101662-102771 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)