CRISPRone

CRISPRone report for GCA_009791355.1_ASM979135v1

♦ Seq 1: WSYN01000016.1 Pseudomonas aeruginosa strain PA-50010278 NODE_16_length_160896_cov_34.130093, whole genome shotgun sequence

⇒Summary: seq-len = 160896 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 141985-152499 bp Zoom in on locus 1 x10 x12 CRISPR array Location: 141985-142563 bp Num of repeats: 10 Spacers: s1-s9 CRISPR array Location: 141985-142563 bp Num of repeats: 10 Spacers: s1-s9 Gene: pfam09707:cas2 Type: universal Location: 142628-142927 bp Gene: cd09719:cas1 Type: universal Location: 142924-143814 bp Gene: pfam08798:cas6e Type: other Location: 143841-144380 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 144427-145089 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 145091-146233 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 146243-146773 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 146770-148338 bp Gene: cd09641:cas3HD Type: Type-I Location: 148341-151022 bp CRISPR array Location: 151798-152499 bp Num of repeats: 12 Spacers: s10-s20 CRISPR array Location: 151798-152499 bp Num of repeats: 12 Spacers: s10-s20 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 141985-142563 bp]: array | spacers
           [Locus range 151798-152499 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)