CRISPRone

CRISPRone report for GCA_009807555.1_ASM980755v1

♦ Seq 1: WUDF01000160.1 Pseudomonas aeruginosa strain UMB4836 NODE_103_length_21728_cov_3.745382, whole genome shotgun sequence

⇒Summary: seq-len = 21728 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1591-12348 bp Zoom in on locus 1 x13 x13 CRISPR array Location: 1591-2352 bp Num of repeats: 13 Spacers: s1-s12 CRISPR array Location: 1591-2352 bp Num of repeats: 13 Spacers: s1-s12 Gene: pfam09707:cas2 Type: universal Location: 2417-2716 bp Gene: cd09719:cas1 Type: universal Location: 2713-3603 bp Gene: pfam08798:cas6e Type: other Location: 3630-4169 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 4216-4878 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 4880-6022 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 6032-6562 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 6559-8127 bp Gene: cd09641:cas3HD Type: Type-I Location: 8130-10811 bp CRISPR array Location: 11587-12348 bp Num of repeats: 13 Spacers: s13-s24 CRISPR array Location: 11587-12348 bp Num of repeats: 13 Spacers: s13-s24 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 1591-2352 bp]: array | spacers
           [Locus range 11587-12348 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)