CRISPRone

CRISPRone report for GCA_009828665.1_ASM982866v1

♦ Seq 1: WTLJ01000083.1 Pseudomonas aeruginosa strain Pb9 sctg_0035_0001, whole genome shotgun sequence

⇒Summary: seq-len = 45958 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 36293-45951 bp Zoom in on locus 1 x8 x11 CRISPR array Location: 36293-36741 bp Num of repeats: 8 Spacers: s1-s7 CRISPR array Location: 36293-36741 bp Num of repeats: 8 Spacers: s1-s7 Gene: cd09739:cas6f Type: other Location: 36924-37487 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 37491-38519 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 38530-39513 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 39500-40804 bp Gene: COG1203:cas3 Type: Type-I Location: 40862-44092 bp Gene: cd09718:cas1 Type: universal Location: 44089-45063 bp CRISPR array Location: 45324-45951 bp Num of repeats: 11 Spacers: s8-s17 CRISPR array Location: 45324-45951 bp Num of repeats: 11 Spacers: s8-s17 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 36293-36741 bp]: array | spacers
           [Locus range 45324-45951 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: WTLJ01000074.1 Pseudomonas aeruginosa strain Pb9 sctg_0027_0001, whole genome shotgun sequence

⇒Summary: seq-len = 91632 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 8-876 bp Zoom in on locus 1 x15 CRISPR array Location: 8-876 bp Num of repeats: 15 Spacers: s1-s14 CRISPR array Location: 8-876 bp Num of repeats: 15 Spacers: s1-s14 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 8-876 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)