CRISPRone

CRISPRone report for GCA_009831175.1_ASM983117v1

♦ Seq 1: WUUI01000004.1 Clostridioides difficile strain TMD0138 NODE_4_length_262201_cov_31.831761, whole genome shotgun sequence

⇒Summary: seq-len = 262201 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 186612-187961 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: WUUI01000007.1 Clostridioides difficile strain TMD0138 NODE_7_length_196318_cov_35.964815, whole genome shotgun sequence

⇒Summary: seq-len = 196318 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 167854-170200 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: WUUI01000001.1 Clostridioides difficile strain TMD0138 NODE_1_length_483781_cov_32.448283, whole genome shotgun sequence

⇒Summary: seq-len = 483781 bp; # of CRISPR array = 0; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: WUUI01000014.1 Clostridioides difficile strain TMD0138 NODE_14_length_135990_cov_30.018210, whole genome shotgun sequence

⇒Summary: seq-len = 135990 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 24163-24519 bp]: array | spacers
           [Locus range 104901-105258 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: WUUI01000002.1 Clostridioides difficile strain TMD0138 NODE_2_length_288396_cov_30.626526, whole genome shotgun sequence

⇒Summary: seq-len = 288396 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 835-1656 bp]: array | spacers
           [Locus range 209923-210083 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: WUUI01000005.1 Clostridioides difficile strain TMD0138 NODE_5_length_246770_cov_27.917776, whole genome shotgun sequence

⇒Summary: seq-len = 246770 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 692-1119 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: WUUI01000012.1 Clostridioides difficile strain TMD0138 NODE_12_length_146319_cov_26.545803, whole genome shotgun sequence

⇒Summary: seq-len = 146319 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 104902-105130 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: WUUI01000013.1 Clostridioides difficile strain TMD0138 NODE_13_length_139596_cov_34.364533, whole genome shotgun sequence

⇒Summary: seq-len = 139596 bp; # of CRISPR array = 3; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 48242-48736 bp]: array | spacers
           [Locus range 50599-50824 bp]: array | spacers
           [Locus range 52508-52799 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: WUUI01000009.1 Clostridioides difficile strain TMD0138 NODE_9_length_188680_cov_38.952639, whole genome shotgun sequence

⇒Summary: seq-len = 188680 bp; # of CRISPR array = 1; # of cas gene = 5  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 73899-74648 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)