CRISPRone

CRISPRone report for GCA_009887645.1_ASM988764v1

♦ Seq 1: WXZS01000002.1 Pseudomonas aeruginosa strain VNMU149 MRSN567329_contig00002, whole genome shotgun sequence

⇒Summary: seq-len = 606291 bp; # of CRISPR array = 0; # of cas gene = 3  (type IV) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 519346-528801 bp Zoom in on locus 1 Gene: pfam13280:WYL Type: other Location: 519346-520422 bp Gene: unk Type: unknown Location: 521233-521514 bp Gene: unk Type: unknown Location: 521504-521785 bp Gene: unk Type: unknown Location: 522191-522772 bp Gene: pfam13280:WYL Type: other Location: 522786-523661 bp Gene: unk Type: unknown Location: 523791-525371 bp Gene: unk Type: unknown Location: 525395-526042 bp Gene: COG1199:DinG Type: Subtype-IV-A Location: 526435-528801 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: WXZS01000042.1 Pseudomonas aeruginosa strain VNMU149 MRSN567329_contig00042, whole genome shotgun sequence

⇒Summary: seq-len = 96540 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 53608-64767 bp Zoom in on locus 1 x12 x32 CRISPR array Location: 53608-54296 bp Num of repeats: 12 Spacers: s1-s11 CRISPR array Location: 53608-54296 bp Num of repeats: 12 Spacers: s1-s11 Gene: cd09739:cas6f Type: other Location: 54479-55042 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 55046-56074 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 56085-57068 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 57055-58359 bp Gene: COG1203:cas3 Type: Type-I Location: 58417-61647 bp Gene: cd09718:cas1 Type: universal Location: 61644-62618 bp CRISPR array Location: 62880-64767 bp Num of repeats: 32 Spacers: s12-s42 CRISPR array Location: 62880-64767 bp Num of repeats: 32 Spacers: s12-s42 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 53608-54296 bp]: array | spacers
           [Locus range 62880-64767 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)