CRISPRone

CRISPRone report for GCA_009887995.1_ASM988799v1

♦ Seq 1: WYAF01000014.1 Pseudomonas aeruginosa strain VNMU089 MRSN489836_contig00014, whole genome shotgun sequence

⇒Summary: seq-len = 538944 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 301756-311962 bp Zoom in on locus 1 x8 x9 CRISPR array Location: 301756-302212 bp Num of repeats: 8 Spacers: s1-s7 CRISPR array Location: 301756-302212 bp Num of repeats: 8 Spacers: s1-s7 Gene: pfam09707:cas2 Type: universal Location: 302277-302576 bp Gene: cd09719:cas1 Type: universal Location: 302573-303463 bp Gene: pfam08798:cas6e Type: other Location: 303490-304029 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 304076-304738 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 304740-305882 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 305892-306422 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 306419-307987 bp Gene: cd09641:cas3HD Type: Type-I Location: 307990-310671 bp CRISPR array Location: 311446-311962 bp Num of repeats: 9 Spacers: s8-s15 CRISPR array Location: 311446-311962 bp Num of repeats: 9 Spacers: s8-s15 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 301756-302212 bp]: array | spacers
           [Locus range 311446-311962 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)