CRISPRone

CRISPRone report for GCA_009901795.1_ASM990179v1

♦ Seq 1: VKOE01000029.1 Pseudomonas aeruginosa strain PA4722 OBOEIKDE_29, whole genome shotgun sequence

⇒Summary: seq-len = 56053 bp; # of CRISPR array = 1; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 37028-47641 bp Zoom in on locus 1 x40 Gene: cd09735:cas8f Type: Subtype-I-F Location: 37028-37402 bp CRISPR array Location: 37230-39849 bp Num of repeats: 40 Spacers: s1-s39 CRISPR array Location: 37230-39849 bp Num of repeats: 40 Spacers: s1-s39 Gene: unk Type: unknown Location: 37445-38482 bp Gene: unk Type: unknown Location: 39302-39814 bp Gene: cd09725:cas2 Type: universal Location: 40031-40321 bp Gene: cd09721:cas1 Type: universal Location: 40331-41371 bp Gene: pfam01930:cas4 Type: Type-I Location: 41375-42007 bp Gene: cd09689:cas7 Type: Subtype-I-C Location: 42026-42895 bp Gene: cd09757:cas8c Type: Subtype-I-C Location: 42892-44685 bp Gene: cd09752:cas5 Type: Subtype-I-C Location: 44682-45356 bp Gene: cd09641:cas3HD Type: Type-I Location: 45407-47641 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 37230-39849 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)