CRISPRone

CRISPRone report for GCA_009905195.1_ASM990519v1

♦ Seq 1: CP047592.1 Pseudomonas aeruginosa strain INP-43 chromosome, complete genome

⇒Summary: seq-len = 6335031 bp; # of CRISPR array = 4; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 2675621-2676849 bp 2 Locus 2: 4002944-4012646 bp Zoom in on locus 1 x21 Zoom in on locus 2 x14 x2 x3 CRISPR array Location: 2675621-2676849 bp Num of repeats: 21 Spacers: s1-s20 CRISPR array Location: 2675621-2676849 bp Num of repeats: 21 Spacers: s1-s20 CRISPR array Location: 4002944-4003752 bp Num of repeats: 14 Spacers: s21-s33 CRISPR array Location: 4002944-4003752 bp Num of repeats: 14 Spacers: s21-s33 Gene: cd09739:cas6f Type: other Location: 4003935-4004498 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 4004502-4005530 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 4005541-4006524 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 4006511-4007815 bp Gene: COG1203:cas3 Type: Type-I Location: 4007873-4011103 bp Gene: cd09718:cas1 Type: universal Location: 4011100-4012074 bp CRISPR array Location: 4012339-4012426 bp Num of repeats: 2 Spacers: s34-s34 CRISPR array Location: 4012339-4012426 bp Num of repeats: 2 Spacers: s34-s34 CRISPR array Location: 4012499-4012646 bp Num of repeats: 3 Spacers: s35-s36 CRISPR array Location: 4012499-4012646 bp Num of repeats: 3 Spacers: s35-s36 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 2675621-2676849 bp]: array | spacers
           [Locus range 4002944-4003752 bp]: array | spacers
           [Locus range 4012339-4012426 bp]: array | spacers
           [Locus range 4012499-4012646 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)