CRISPRone

CRISPRone report for GCA_010694505.1_ASM1069450v1

♦ Seq 1: CP048791.1 Pseudomonas aeruginosa strain VIT PC9 chromosome, complete genome

⇒Summary: seq-len = 6367369 bp; # of CRISPR array = 2; # of cas gene = 9  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 2853702-2864206 bp Zoom in on locus 1 x6 x16 CRISPR array Location: 2853702-2854038 bp Num of repeats: 6 Spacers: s1-s5 CRISPR array Location: 2853702-2854038 bp Num of repeats: 6 Spacers: s1-s5 Gene: cd09641:cas3HD Type: Type-I Location: 2854892-2857402 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 2857562-2857951 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 2857948-2859057 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 2859054-2859584 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 2859594-2860736 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 2860738-2861400 bp Gene: pfam08798:cas6e Type: other Location: 2861641-2861985 bp Gene: cd09719:cas1 Type: universal Location: 2862012-2862902 bp Gene: pfam09707:cas2 Type: universal Location: 2862899-2863198 bp CRISPR array Location: 2863262-2864206 bp Num of repeats: 16 Spacers: s6-s20 CRISPR array Location: 2863262-2864206 bp Num of repeats: 16 Spacers: s6-s20 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 2853702-2854038 bp]: array | spacers
           [Locus range 2863262-2864206 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)