CRISPRone

CRISPRone report for GCA_011045375.1_ASM1104537v1

♦ Seq 1: CP049161.1 Pseudomonas aeruginosa strain MS14403 chromosome, complete genome

⇒Summary: seq-len = 6282181 bp; # of CRISPR array = 3; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1486279-1487207 bp 2 Locus 2: 2773072-2783451 bp Zoom in on locus 1 x16 Zoom in on locus 2 x17 x14 CRISPR array Location: 1486279-1487207 bp Num of repeats: 16 Spacers: s1-s15 CRISPR array Location: 1486279-1487207 bp Num of repeats: 16 Spacers: s1-s15 CRISPR array Location: 2773072-2774061 bp Num of repeats: 17 Spacers: s16-s31 CRISPR array Location: 2773072-2774061 bp Num of repeats: 17 Spacers: s16-s31 Gene: cd09739:cas6f Type: other Location: 2774244-2774807 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 2774811-2775839 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 2775850-2776833 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 2776820-2778124 bp Gene: COG1203:cas3 Type: Type-I Location: 2778182-2781412 bp Gene: cd09718:cas1 Type: universal Location: 2781409-2782383 bp CRISPR array Location: 2782644-2783451 bp Num of repeats: 14 Spacers: s32-s44 CRISPR array Location: 2782644-2783451 bp Num of repeats: 14 Spacers: s32-s44 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 1486279-1487207 bp]: array | spacers
           [Locus range 2773072-2774061 bp]: array | spacers
           [Locus range 2782644-2783451 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)