CRISPRone

CRISPRone report for GCA_011106815.1_ASM1110681v1

♦ Seq 1: CP045003.1 Pseudomonas aeruginosa strain PAG5 plasmid pPAG5, complete sequence

⇒Summary: seq-len = 513322 bp; # of CRISPR array = 0; # of cas gene = 3  NA .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 33129-35728 bp Zoom in on locus 1 Gene: COG2378:WYL Type: other Location: 33129-33971 bp Gene: unk Type: unknown Location: 34249-34470 bp Gene: COG2378:WYL Type: other Location: 34713-35075 bp Gene: pfam13280:WYL Type: other Location: 35081-35728 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: CP045002.1 Pseudomonas aeruginosa strain PAG5 chromosome, complete genome

⇒Summary: seq-len = 6716578 bp; # of CRISPR array = 1; # of cas gene = 3  (type IV) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1497887-1498456 bp 2 Locus 2: 3439936-3443729 bp Zoom in on locus 1 x10 Zoom in on locus 2 CRISPR array Location: 1497887-1498456 bp Num of repeats: 10 Spacers: s1-s9 CRISPR array Location: 1497887-1498456 bp Num of repeats: 10 Spacers: s1-s9 Gene: COG1199:DinG Type: Subtype-IV-A Location: 3439936-3442014 bp Gene: pfam13280:WYL Type: other Location: 3442016-3442921 bp Gene: pfam09002:csx1 Type: Type-III Location: 3443253-3443729 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 1497887-1498456 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)