CRISPRone

CRISPRone report for GCA_011683055.1_ASM1168305v1

♦ Seq 1: VCOV01000024.1 Pseudomonas aeruginosa strain CPa12-2 Scaffold24, whole genome shotgun sequence

⇒Summary: seq-len = 91739 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 21419-32268 bp Zoom in on locus 1 x10 x29 CRISPR array Location: 21419-21987 bp Num of repeats: 10 Spacers: s1-s9 CRISPR array Location: 21419-21987 bp Num of repeats: 10 Spacers: s1-s9 Gene: cd09718:cas1 Type: universal Location: 22238-23212 bp Gene: COG1203:cas3 Type: Type-I Location: 23209-26439 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 26497-27801 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 27788-28771 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 28782-29810 bp Gene: cd09739:cas6f Type: other Location: 29814-30377 bp CRISPR array Location: 30561-32268 bp Num of repeats: 29 Spacers: s10-s37 CRISPR array Location: 30561-32268 bp Num of repeats: 29 Spacers: s10-s37 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 21419-21987 bp]: array | spacers
           [Locus range 30561-32268 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: VCOV01000001.1 Pseudomonas aeruginosa strain CPa12-2 Scaffold1, whole genome shotgun sequence

⇒Summary: seq-len = 748425 bp; # of CRISPR array = 0; # of cas gene = 3  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 590416-601656 bp Zoom in on locus 1 Gene: cd09710:cas3 Type: Subtype-I-D Location: 590416-593223 bp Gene: unk Type: unknown Location: 593226-595811 bp Gene: unk Type: unknown Location: 596512-600252 bp Gene: mkCas0115:csx3 Type: other Location: 600276-600737 bp Gene: pfam13280:WYL Type: other Location: 600742-601656 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)