CRISPRone

CRISPRone report for GCA_011812885.1_ASM1181288v1

♦ Seq 1: JAATKX010000326.1 Clostridioides difficile strain SJ13A NODE_529_length_6451_cov_31.941559, whole genome shotgun sequence

⇒Summary: seq-len = 6553 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 5327-5683 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: JAATKX010000182.1 Clostridioides difficile strain SJ13A NODE_344_length_10734_cov_21.033073, whole genome shotgun sequence

⇒Summary: seq-len = 10836 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2851-3673 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: JAATKX010000374.1 Clostridioides difficile strain SJ13A NODE_600_length_17705_cov_32.695282, whole genome shotgun sequence

⇒Summary: seq-len = 17807 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 16566-17774 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: JAATKX010000250.1 Clostridioides difficile strain SJ13A NODE_436_length_12126_cov_50.145309, whole genome shotgun sequence

⇒Summary: seq-len = 12228 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1291-1516 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: JAATKX010000538.1 Clostridioides difficile strain SJ13A NODE_769_length_1681_cov_18.478287, whole genome shotgun sequence

⇒Summary: seq-len = 1783 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: JAATKX010000373.1 Clostridioides difficile strain SJ13A NODE_599_length_786_cov_13.007633, whole genome shotgun sequence

⇒Summary: seq-len = 888 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 531-889 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: JAATKX010000328.1 Clostridioides difficile strain SJ13A NODE_531_length_14459_cov_24.391867, whole genome shotgun sequence

⇒Summary: seq-len = 14561 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 5230-5656 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: JAATKX010000537.1 Clostridioides difficile strain SJ13A NODE_768_length_25434_cov_33.090389, whole genome shotgun sequence

⇒Summary: seq-len = 25536 bp; # of CRISPR array = 0; # of cas gene = 3  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: JAATKX010000327.1 Clostridioides difficile strain SJ13A NODE_530_length_3961_cov_25.928553, whole genome shotgun sequence

⇒Summary: seq-len = 4063 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1889-3430 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: JAATKX010000249.1 Clostridioides difficile strain SJ13A NODE_435_length_3993_cov_32.022289, whole genome shotgun sequence

⇒Summary: seq-len = 4095 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 487-713 bp]: array | spacers
           [Locus range 1315-2135 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)