CRISPRone

CRISPRone report for GCA_011812895.1_ASM1181289v1

♦ Seq 1: JAATKY010000366.1 Clostridioides difficile strain SJ06 NODE_527_length_3760_cov_24.406649, whole genome shotgun sequence

⇒Summary: seq-len = 3850 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1929-2684 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: JAATKY010000692.1 Clostridioides difficile strain SJ06 NODE_879_length_8700_cov_37.850460, whole genome shotgun sequence

⇒Summary: seq-len = 8790 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 6773-6866 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: JAATKY010000327.1 Clostridioides difficile strain SJ06 NODE_483_length_11756_cov_34.111347, whole genome shotgun sequence

⇒Summary: seq-len = 11846 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2296-2656 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: JAATKY010000569.1 Clostridioides difficile strain SJ06 NODE_744_length_3368_cov_27.647566, whole genome shotgun sequence

⇒Summary: seq-len = 3458 bp; # of CRISPR array = 0; # of cas gene = 3  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: JAATKY010000225.1 Clostridioides difficile strain SJ06 NODE_350_length_7637_cov_70.819298, whole genome shotgun sequence

⇒Summary: seq-len = 7727 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 4782-4876 bp]: array | spacers
           [Locus range 6601-7224 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: JAATKY010000472.1 Clostridioides difficile strain SJ06 NODE_640_length_1879_cov_30.292709, whole genome shotgun sequence

⇒Summary: seq-len = 1969 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 63-488 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: JAATKY010000367.1 Clostridioides difficile strain SJ06 NODE_528_length_8697_cov_21.348396, whole genome shotgun sequence

⇒Summary: seq-len = 8787 bp; # of CRISPR array = 1; # of cas gene = 7  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 7598-8803 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: JAATKY010000391.1 Clostridioides difficile strain SJ06 NODE_556_length_8585_cov_29.569365, whole genome shotgun sequence

⇒Summary: seq-len = 8675 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 5727-6281 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: JAATKY010000579.1 Clostridioides difficile strain SJ06 NODE_754_length_8735_cov_36.840984, whole genome shotgun sequence

⇒Summary: seq-len = 8825 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3423-3516 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: JAATKY010000224.1 Clostridioides difficile strain SJ06 NODE_349_length_9014_cov_52.649212, whole genome shotgun sequence

⇒Summary: seq-len = 9104 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 4966-5190 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 11: JAATKY010000226.1 Clostridioides difficile strain SJ06 NODE_351_length_5125_cov_25.708488, whole genome shotgun sequence

⇒Summary: seq-len = 5215 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2886-3372 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)