CRISPRone

CRISPRone report for GCA_011881445.1_ASM1188144v1

♦ Seq 1: JAATNR010000515.1 Clostridioides difficile strain HC68 NODE_968_length_8124_cov_17.415560, whole genome shotgun sequence

⇒Summary: seq-len = 8226 bp; # of CRISPR array = 1; # of cas gene = 6  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 5884-6966 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: JAATNR010000122.1 Clostridioides difficile strain HC68 NODE_290_length_25389_cov_34.152233, whole genome shotgun sequence

⇒Summary: seq-len = 25491 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 12715-13006 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: JAATNR010000451.1 Clostridioides difficile strain HC68 NODE_902_length_4402_cov_16.127214, whole genome shotgun sequence

⇒Summary: seq-len = 4504 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2275-2568 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: JAATNR010000956.1 Clostridioides difficile strain HC68 NODE_1529_length_2734_cov_20.985735, whole genome shotgun sequence

⇒Summary: seq-len = 2836 bp; # of CRISPR array = 0; # of cas gene = 3  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: JAATNR010000589.1 Clostridioides difficile strain HC68 NODE_1078_length_545_cov_14.726605, whole genome shotgun sequence

⇒Summary: seq-len = 647 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 412-573 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: JAATNR010000637.1 Clostridioides difficile strain HC68 NODE_1139_length_4102_cov_20.197222, whole genome shotgun sequence

⇒Summary: seq-len = 4204 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3682-4172 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: JAATNR010001096.1 Clostridioides difficile strain HC68 NODE_1673_length_3394_cov_12.890985, whole genome shotgun sequence

⇒Summary: seq-len = 3496 bp; # of CRISPR array = 0; # of cas gene = 4  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: JAATNR010000636.1 Clostridioides difficile strain HC68 NODE_1138_length_6291_cov_23.245111, whole genome shotgun sequence

⇒Summary: seq-len = 6393 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 400-756 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: JAATNR010000807.1 Clostridioides difficile strain HC68 NODE_1378_length_4137_cov_18.092337, whole genome shotgun sequence

⇒Summary: seq-len = 4239 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3800-3960 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: JAATNR010000701.1 Clostridioides difficile strain HC68 NODE_1268_length_829_cov_8.290711, whole genome shotgun sequence

⇒Summary: seq-len = 931 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 232-592 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)