CRISPRone

CRISPRone report for GCA_011881455.1_ASM1188145v1

♦ Seq 1: JAATNP010000473.1 Clostridioides difficile strain HC58 NODE_626_length_5285_cov_22.096878, whole genome shotgun sequence

⇒Summary: seq-len = 5375 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2130-2488 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: JAATNP010000629.1 Clostridioides difficile strain HC58 NODE_793_length_1235_cov_20.382187, whole genome shotgun sequence

⇒Summary: seq-len = 1325 bp; # of CRISPR array = 0; # of cas gene = 3  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: JAATNP010000391.1 Clostridioides difficile strain HC58 NODE_543_length_3123_cov_20.530899, whole genome shotgun sequence

⇒Summary: seq-len = 3213 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2400-2958 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: JAATNP010000279.1 Clostridioides difficile strain HC58 NODE_416_length_831_cov_16.173285, whole genome shotgun sequence

⇒Summary: seq-len = 921 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 243-472 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: JAATNP010000543.1 Clostridioides difficile strain HC58 NODE_704_length_2427_cov_27.267408, whole genome shotgun sequence

⇒Summary: seq-len = 2517 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 33-522 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: JAATNP010000359.1 Clostridioides difficile strain HC58 NODE_504_length_5379_cov_20.354898, whole genome shotgun sequence

⇒Summary: seq-len = 5469 bp; # of CRISPR array = 1; # of cas gene = 5  NA 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 4913-5469 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: JAATNP010000163.1 Clostridioides difficile strain HC58 NODE_265_length_2936_cov_20.061649, whole genome shotgun sequence

⇒Summary: seq-len = 3026 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: JAATNP010000155.1 Clostridioides difficile strain HC58 NODE_257_length_308_cov_16.724026, whole genome shotgun sequence

⇒Summary: seq-len = 398 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 186-411 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: JAATNP010000358.1 Clostridioides difficile strain HC58 NODE_503_length_554_cov_15.424188, whole genome shotgun sequence

⇒Summary: seq-len = 644 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 76-432 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: JAATNP010000174.1 Clostridioides difficile strain HC58 NODE_276_length_2740_cov_16.133942, whole genome shotgun sequence

⇒Summary: seq-len = 2830 bp; # of CRISPR array = 0; # of cas gene = 3  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 11: JAATNP010000333.1 Clostridioides difficile strain HC58 NODE_476_length_10159_cov_22.759819, whole genome shotgun sequence

⇒Summary: seq-len = 10249 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 5076-5696 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 12: JAATNP010000280.1 Clostridioides difficile strain HC58 NODE_417_length_3517_cov_16.377594, whole genome shotgun sequence

⇒Summary: seq-len = 3607 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3382-3607 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 13: JAATNP010000281.1 Clostridioides difficile strain HC58 NODE_418_length_6924_cov_46.481224, whole genome shotgun sequence

⇒Summary: seq-len = 7014 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 6417-6772 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 14: JAATNP010000565.1 Clostridioides difficile strain HC58 NODE_726_length_18224_cov_25.923836, whole genome shotgun sequence

⇒Summary: seq-len = 18314 bp; # of CRISPR array = 0; # of cas gene = 3  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 15: JAATNP010000360.1 Clostridioides difficile strain HC58 NODE_505_length_8236_cov_20.916344, whole genome shotgun sequence

⇒Summary: seq-len = 8326 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 0-1194 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)