CRISPRone

CRISPRone report for GCA_011881465.1_ASM1188146v1

♦ Seq 1: JAATNQ010000558.1 Clostridioides difficile strain HC59 NODE_764_length_4634_cov_25.313553, whole genome shotgun sequence

⇒Summary: seq-len = 4740 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 628-853 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: JAATNQ010000557.1 Clostridioides difficile strain HC59 NODE_763_length_2781_cov_13.611291, whole genome shotgun sequence

⇒Summary: seq-len = 2887 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2101-2850 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: JAATNQ010000393.1 Clostridioides difficile strain HC59 NODE_577_length_11765_cov_50.486614, whole genome shotgun sequence

⇒Summary: seq-len = 11871 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 934-1159 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: JAATNQ010000513.1 Clostridioides difficile strain HC59 NODE_713_length_3806_cov_15.687598, whole genome shotgun sequence

⇒Summary: seq-len = 3912 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1182-1609 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: JAATNQ010000392.1 Clostridioides difficile strain HC59 NODE_576_length_5791_cov_18.908825, whole genome shotgun sequence

⇒Summary: seq-len = 5897 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3291-4044 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: JAATNQ010000390.1 Clostridioides difficile strain HC59 NODE_574_length_4196_cov_27.034557, whole genome shotgun sequence

⇒Summary: seq-len = 4302 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 607-833 bp]: array | spacers
           [Locus range 1435-2124 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: JAATNQ010000881.1 Clostridioides difficile strain HC59 NODE_1095_length_2501_cov_18.150740, whole genome shotgun sequence

⇒Summary: seq-len = 2607 bp; # of CRISPR array = 0; # of cas gene = 3  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: JAATNQ010000462.1 Clostridioides difficile strain HC59 NODE_649_length_1208_cov_16.765728, whole genome shotgun sequence

⇒Summary: seq-len = 1314 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 235-1316 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)